Dear users, we have installed a new software: manta 1.6.0:
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
manta: manta/1.6.0
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Description:
Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs.
Manta discovers, assembles and scores large-scale SVs, medium-sized indels and large insertions within a single efficient workflow.
This module can be loaded directly: module load manta/1.6.0
Help:
Description
===========
Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads.
It is optimized for analysis of germline variation in small sets of individuals and
somatic variation in tumor/normal sample pairs. Manta discovers, assembles and
scores large-scale SVs, medium-sized indels and large insertions within a
single efficient workflow.
More information
================
- Homepage: https://github.com/Illumina/manta
Best,
HPC team