Survey about software used on Baobab

HPC PL12146
21

Hi,
I use Python (Tensorflow for the most part)
And I’m from the Group of Applied Physics

22

Hi there!

I (will) mostly use FSL and Python and I am from the Department of Medicine!

Sara

23

Bonjour,

j’utilise R et je fais partie de GSEM.

Cordialement, Eva Cantoni

24

Hi,
I use mostly R and often matlab. For FPSE
Olivier

25

Hello,

  1. I work on R
  2. faculty of medicine (statistics/epidemiology)

best,
delphine

26

Hi,

I am part of the DPT and work primarily with python.

Cheers,
Michael

27

anaconda
Faculty of medicine

28

Dear Yann,

I use matlab and R. I work in the dept. of Basic neurosciences.
Best,
Julian

29

Ah, yess I use the mosh serever to connect to baobab

30

On my side other than core linux utilities like rsync, ssh, cat, echo, htop ; I only use Singularity.
I have also installed in my home directory kubectl to interact with my personal kubernetes cluster from baobab mainly as a callback to indicate that a job is finished.

I’m in the data mining team in HEG and University in computer science.

1 Like
31

Hi

I am from Department of Astronomy, and for the variety of experiments we have a lot of different software packages, written mostly in C, C++, python, Java, Go, etc and using many other common libraries.
So I use them in singularity, with a very simple bash scripts, linking the workflows to the services outside baobab.

Cheers

Volodymyr

32

Hello,
I work with tensorflow-gpu/keras (python) and pytorch (cuDNN based).
Faculty of Sciences (Neuroscience)

33

Dear Yann,
I’m from the department of astronomy.
I’m using:

  • rust
  • fortran
  • python
    Cheers,
    Emeline
34

I use R and Stata and work at GSEM

Michele

35

I use samtools, RAXML, HybPiper
I am working at the Botanical Garden of Geneva

36

Hi Yann,

I mostly use Gromacs, sometimes Gaussian and Python.
I work at the Department of Pharmaceutical Sciences.

Best,
Laco

37

I use MESA and anaconda3 as python distribution.
I work in the Astronomy Department.

38

I use python, mostly with TensorFlow on the GPUs.
Singularity to run docker images.
TeXLive (though mostly in conjuction with python+Matplotlib).

I’m in the DPNC.

39

I use R and Stata.
I’m part of SdS.

40

1:
Petsc
Matlab

2:
Faculty of Science (sciences de la terre)