HPC Support

HPC issues Username: $USER Cluster: $CLUSTER (ex: Yggdrasil) HPC Wish list Wish list for anything you think would improve Baobab HPC administrative The administrative category is dedicated to all your public questions regarding HPC that aren’t… technical:)

Topic	Replies	Views	Activity
About the HPC Support category HPC Support	0	90	January 16, 2023
GPU nodes drained on Yggdrasil and Bamboo — issue-7530: security HPC issues	0	9	May 22, 2026
Baobab nodes ssh access HPC issues baobab	1	20	May 19, 2026
Feedback: Missing GPU count information in "for_advanced_users" documentation HPC Wish list	2	38	May 8, 2026
Gpu009 and gpu010 is drained on bamboo HPC issues bamboo	2	44	May 7, 2026
Issue running >12h simulations on private-kruse-gpu HPC issues slurm , baobab	1	29	May 5, 2026
Need to install GDAL for python (admin privilege required) HPC issues baobab	1	31	April 27, 2026
[Baobab] cpu001 is drained HPC issues baobab	1	28	April 23, 2026
[Baobab] gpu048 is drained HPC issues baobab	1	34	April 22, 2026
Can't login to baobab HPC issues baobab	2	41	April 17, 2026
Python scripts to check CPU hours usage now fails HPC issues slurm	4	32	April 17, 2026
X11 error: cannot lock .Xauthority file HPC issues bamboo	3	29	April 16, 2026
Nextflow - nf-core - pull HPC Support	3	34	April 15, 2026
New Nexflow version (25.10.04) HPC Wish list	2	29	April 13, 2026
Communication error on send HPC issues bamboo	8	71	April 7, 2026
[Baobab] SSH key rejected for Outsider account with dual identity (student + outsider) HPC issues baobab	2	35	April 3, 2026
Baobab: Communication error on send HPC issues baobab	1	33	March 31, 2026
Open-on-demand on bamboo do not detect account HPC issues bamboo , openondemand	2	40	March 26, 2026
[bamboo] gpu006 nvidia driver in a bad state HPC issues	1	15	March 20, 2026
[baobab] gpu022 is down HPC issues	2	18	March 20, 2026
Syntax error ug_getNodeCharacteristicsSummary.py HPC issues	3	17	March 19, 2026
Storage usage script HPC issues	2	20	March 19, 2026
Baobab: unable to contact slurm controller HPC issues slurm , baobab	1	27	March 17, 2026
Baobab - unable to upload files HPC issues baobab	2	22	March 16, 2026
Most nodes draining on Baobab HPC issues	1	25	March 16, 2026
Cvmfs singularity.galaxyproject.org do not seem to be mounted on cpu001 baobab HPC issues baobab	1	17	March 13, 2026
Invalid account/partition combination specified HPC issues slurm , baobab	1	21	March 11, 2026
No trace of submitted SLURM JOB HPC issues	9	42	March 11, 2026
Invalid account HPC issues	3	19	February 26, 2026
Gurobi license expired since 25 Feb 2026 HPC issues yggdrasil	3	19	February 25, 2026