HPC Support

HPC issues Username: $USER Cluster: $CLUSTER (ex: Yggdrasil) HPC Wish list Wish list for anything you think would improve Baobab HPC administrative The administrative category is dedicated to all your public questions regarding HPC that aren’t… technical:)

Topic	Replies	Views	Activity
About the HPC Support category HPC Support	0	85	January 16, 2023
[Baobab] cpu001 is drained HPC issues baobab	1	9	April 23, 2026
[Baobab] gpu048 is drained HPC issues baobab	1	13	April 22, 2026
Can't login to baobab HPC issues baobab	2	23	April 17, 2026
Python scripts to check CPU hours usage now fails HPC issues slurm	4	15	April 17, 2026
X11 error: cannot lock .Xauthority file HPC issues bamboo	3	12	April 16, 2026
Nextflow - nf-core - pull HPC Support	3	18	April 15, 2026
New Nexflow version (25.10.04) HPC Wish list	2	13	April 13, 2026
Communication error on send HPC issues bamboo	8	57	April 7, 2026
[Baobab] SSH key rejected for Outsider account with dual identity (student + outsider) HPC issues baobab	2	16	April 3, 2026
Baobab: Communication error on send HPC issues baobab	1	21	March 31, 2026
Feedback: Missing GPU count information in "for_advanced_users" documentation HPC Wish list	1	10	March 27, 2026
Open-on-demand on bamboo do not detect account HPC issues bamboo , openondemand	2	37	March 26, 2026
[bamboo] gpu006 nvidia driver in a bad state HPC issues	1	13	March 20, 2026
[baobab] gpu022 is down HPC issues	2	17	March 20, 2026
Syntax error ug_getNodeCharacteristicsSummary.py HPC issues	3	15	March 19, 2026
Storage usage script HPC issues	2	19	March 19, 2026
Baobab: unable to contact slurm controller HPC issues slurm , baobab	1	23	March 17, 2026
Baobab - unable to upload files HPC issues baobab	2	22	March 16, 2026
Most nodes draining on Baobab HPC issues	1	25	March 16, 2026
Cvmfs singularity.galaxyproject.org do not seem to be mounted on cpu001 baobab HPC issues baobab	1	17	March 13, 2026
Invalid account/partition combination specified HPC issues slurm , baobab	1	21	March 11, 2026
No trace of submitted SLURM JOB HPC issues	9	37	March 11, 2026
Invalid account HPC issues	3	17	February 26, 2026
Gurobi license expired since 25 Feb 2026 HPC issues yggdrasil	3	17	February 25, 2026
Job doesn't start and cannot be stop, stuck in CG on yggdrasil HPC Support	3	24	February 25, 2026
I/O erros when using Anaconda3 module HPC issues	1	30	February 23, 2026
I/O error on yggdrasil HPC issues yggdrasil	2	39	February 23, 2026
Removed scratch folder HPC issues	1	28	February 20, 2026
Can't connect to Yggdrasil : issue HPC issues yggdrasil	1	26	February 12, 2026