Cluster.json file

HPC Technical
1

Hi everyone,

I try to run a program that suppose that I have a cluster.json file in my working directory.
I look a bit on internet what type of file it is and how it look like but I don’t have any idea how to build it for let’s say my yggdrasil home.

Does anybody knows how to find it or how to build it?

Thank you very much.

camille

2

Hi @Camille.Christe

You are the only one to get access to your mind :wink:, could you give us more details about your issue ?

  • Which program you are using ?
  • What do you want to do ?
  • other details even if you think there are not relevent

If you really need this file :laughing::

(baobab)-[toto@login2 ~]$ touch cluster.json
3

Hi @Adrien.Albert,

I try to run a pipeline called atlas-pipeline wegmannlab / ATLAS-Pipeline / wiki / Home — Bitbucket
In the parameters it is specified that “-c run on a slurm cluster cluster file can be provided. Default: assumes a cluster.json in your working directory”

I don’t have thus file in my working directory. So I look on internet to see what kind of file it could be. And if I understood well it seems to be a file with information about the cluster used.

I have no idea how to build this file and what exact information I should provide inside.

Is it something common or should I ask the author of the pipeline for help?

Thank you very much,

camille

4

Hi, as we discussed by email, you should contact directly the author as we have no clue how this software is working.

Best

Yann