Issues with python packages on Yggdrasil


I am facing issues using Python when loading any module with spider that contains Python packages.
I’m loading them on yggdrasil on CPU nodes with e.g. the following commands:

module load GCC/11.2.0  OpenMPI/4.1.1 SciPy-bundle/2021.10

but then, when I try to run an IPython istance it fails with following error:

(yggdrasil)-[franchel@cpu003 ~]$ python3
python3: error while loading shared libraries: cannot open shared object file: No such file or directory

This happens when any module containing python packages is loaded. While if I don’t load anything, IPython instances are working.

Is this a known issue? Am I missing something?

Thank you in advance for any help!


Hi @Stefano.Franchellucci

this is fixed: [2023] Current issues on HPC Cluster - #7 by Yann.Sagon



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