Dear users, we have installed a new software: kraken 1.1.1:
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Kraken: Kraken/1.1.1
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Description:
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. Previous attempts by other bioinformatics software to accomplish this task have
often used sequence alignment or machine learning techniques that were quite slow, leading to the development of less sensitive but much faster abundance estimation programs. Kraken aims to achieve
high sensitivity and high speed by utilizing exact alignments of k-mers and a novel classification algorithm.
You will need to load all module(s) on any one of the lines below before the "Kraken/1.1.1" module is available to load.
GCCcore/11.2.0
Help:
Description
===========
Kraken is a system for assigning taxonomic labels to short DNA sequences,
usually obtained through metagenomic studies. Previous attempts by other
bioinformatics software to accomplish this task have often used sequence
alignment or machine learning techniques that were quite slow, leading to
the development of less sensitive but much faster abundance estimation
programs. Kraken aims to achieve high sensitivity and high speed by
utilizing exact alignments of k-mers and a novel classification algorithm.
More information
================
- Homepage: https://ccb.jhu.edu/software/kraken/
Best,
HPC team