Dear users,
we have installed a new software: sinto 0.7.3.1
[sagon@login2 ~] $ ml spider sinto
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
sinto: sinto/0.7.3.1-Python-3.8.6
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Description:
Sinto is a toolkit for processing aligned single-cell data. Sinto includes functions to: Subset reads from a BAM file by cell barcode Create a scATAC-seq fragments file from a BAM file Add read tags to a BAM file according to
cell barcode information
You will need to load all module(s) on any one of the lines below before the "sinto/0.7.3.1-Python-3.8.6" module is available to load.
GCC/10.2.0 OpenMPI/4.0.5
Help:
Description
===========
Sinto is a toolkit for processing aligned single-cell data. Sinto includes functions to:
Subset reads from a BAM file by cell barcode
Create a scATAC-seq fragments file from a BAM file
Add read tags to a BAM file according to cell barcode information
More information
================
- Homepage: https://timoast.github.io/sinto/index.html